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The National Research Fund facilitates research for the advancement of Science, Technology and Innovation. One of our core functions is to compile and maintain a national database of research and innovation projects funded by the Fund and other agencies as per the STI Act of 2013.

 

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Publication
One-pot microwave-assisted synthesis of size￾dependent L-glutathione-capped spherical silver nanoparticles suitable for materials with antibacterial properties
(British society for nanomedicine, 2019-06-20) Samuel N. Nyamu, Lucy Ombaka, Eric Masika & Margaret Ng’ang’a
In the last years, there has been an alarming increase in antibiotic resistance by patho￾genic microbes, which has become a major public health concern. There is a great interest in developing new antimicrobial for reducing the impact. Silver nanoparticles (AgNPs) as antibacterial agents are currently being studied to be used to fight these pathogenic mi￾crobes. The aim of the present study was to synthesize AgNPs of different sizes through the use of microwave and determine their antimicrobial activities. Synthesis of size￾dependent L-glutathione-capped spherical nanoparticles through one-pot microwave syn￾thesis was achieved, and their antimicrobial properties were determined. Different sizes of AgNPs between 5–10, 15–35, and 50–80 nm were made by varying the concentration of silver nitrate and using sodium borohydride (NaBH4) as a reducing agent. L-glutathione was used to stabilize the AgNPs to prevent them from aggregation in the colloidal solution. The synthesized AgNPs showed ultraviolet absorption at around 400 nm with high concen￾tration of AgNO3 having sharp peaks. The formed particles were crystalline in nature with uniform spherical shape. The formed AgNPs were of crystalline size of 9.94, 18.45, 34.96, 52.40, and 58.50 nm. Fourier transform infrared analysis confirmed conjugation of gluta￾thione as a capping agent to AgNPs as the result of the formed spectra showing the absence of ─SH stretch. The high temperature generated by microwave helped to synthesize nano￾particles within a short time and by varying the concentration of AgNO3 helped obtain the desired particle size. Glutathione conjugated well with AgNPs as a result of interaction of negative thiol resulting to colloidal stabilization and reduced aggregation. The antibacte￾rial activity of AgNPs was found to be size dependent with the smaller size of 9.94 nm be￾ing more efficient than 18.45, 34.96, 52.40, and 58.50 nm against the tested strains Bacillus subtilis (ATCC 6633), Escherichia coli (ATCC 25922), Salmonella spp. (ATCC 700623), and Staphylococcus aureus (ATCC 25923). Of the four stains, E. coli was found to be the least affected by all three different particle sizes of the synthesized AgNPs
Publication
Antimicrobial Photodynamic Activity of Phthalocyanine Derivatives
(Hindawi Advances in Chemistry, 2018-03-19) Samuel N. Nyamu, Lucy Ombaka, Eric Masika, and Margaret Ng’ang’a
Microbial pathogens have increasingly shown multidrug resistance posing a serious threat to the public health. Advances in technology are opening novel avenues for discovery of compounds that will mitigate the ever-increasing drug-resistant microbes. Use of photodynamic photosensitizer is one of the promising alternative approaches since they ofer low risk of bacteria resistance as they use generated reactive oxygen species to kill the microbes. Phthalocyanine (Pc) is one such photosensitizer which has already shown promising antimicrobial photodynamic therapeutic properties. Previous studies have shown efectiveness of the Pc against Gram-positive bacteria. However, its efectiveness toward Gram-negative bacteria is limited by the impermeability of the bacteria’s outer membrane which is made up of lipopolysaccharides layer. Te efectiveness of this photosensitizer is determined by its photophysical and photochemical properties such as singlet/triplet lifetimes, singlet oxygen quantum yields, and fuorescence quantum yield. Terefore, this review focuses on the recent signifcance advances on designing Pc that have this improved property by either conjugating with nanoparticles, quantum dots, functional groups in peripheral position, considering efect of cationic charge, and its position on the macrocycle.
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FREQUENCY OF SULFADOXINE PYRIMETHAMINE RESISTANCE ASSOCIATED GENE MUTATIONS IN PLASMODIUM FALCIPARUM CLINICAL ISOLATES FROM KWALE COUNTY, KENYA
(2020-01) WINFRED KENDI MUTWIRI
Malaria persists to be one of the world’s complex and dynamic disease. The disease is more devastating in sub-Saharan Africa as it constitutes high cases of childhood mortality and morbidity. Management of the disease remains a problem as a result of the spread of parasites that are resistant to the available drugs. Due to the broadened spread of resistance to Sulfadoxine Pyrimethamine (SP), the artemether-lumefantrine which is a more effective and well-tolerated anti-malarial drug replaced the SP as the first-line regimen in treatment of uncomplicated malaria in Kenya. However, SP remains the suggested drug to treat and prevent malaria in expectant women and children under the age of five. This study sought to assess the presence of mutation in dihydrofolate reductase and dihydropteroate synthase genes associated with SP resistance a decade after Sulfadoxine-Pyrimethamine was withdrawn as the first-line anti-malarial drug of choice in Kenya. Smear-positive samples (N = 134) collected from a 2013 cross-sectional study in infants managed at Msambweni District Hospital were evaluated for mutations in dhfr and dhps (SP).The findings obtained were matched up with molecular data from infants in Western Kenya in a study carried out in 2003/05. In all the 134 samples, mutations at codons N51I, C59R, S108N had a high predominance at 80.6%, 72.4% and 93.3% respectively. The double mutant of Pfdhps A437G/ K540E had an occurrence rate of 82.1% and 78.4% respectively. Compared to the molecular data of 2003/05 study, the Pfdhfr triple mutant (S108N/N51I/C59R) genotype decreased to 63.4% in 2013 up from 68%. However, this reduction was not significant (p=0.387). There was no significant change in the prevalence of Pfdhps double mutant (A437G/K540E) genotype (p=0.485). The percentage of isolates which had the Pfdhps A437G/K540E/ Pfdhfr N51I/C59R/S108N quintuple mutant linked with SP-resistance did not change significantly over the two study periods under consideration (53.5% in 2003/05 versus 53.7% in 2013, p = 0.967).The high prevalence of SP resistance marker in the coastal Kenya could be attributed to circulation and SP drugs being sold over the counter which has maintained a selection pressure for the mutations and fixation in the key mutations in the inhabitants. Also the mutation could have a little effect on the fitness of fit of the parasite such that withdrawal of drug pressure did not offer any survival disadvantage hence the continued spread of resistant parasites. Further investigations should be done to determine the linkage between SP drug resistance associated mutations and efficacy of IPTi-SP since the mutation levels are still high. It is also recommended that doctors using SP for IPTi and IPTp should be more cautious and their use monitored to ensure cases of poor response are managed with a different drug.
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SEROPROFILE, GENETIC DIVERSITY AND DRUG RESISTANCE OF HEPATITIS B VIRUS AMONG INFECTED INDIVIDUAL ATTAENDING MAMA LUCY KIBAKI
(2016) SEPHA NYATICHI MABEYA
Human immune deficiency virus (HIV) and Hepatitis B virus(HBV) coinfection is highly prevalent among high risk populations including pregnant women and infants. This poses a global public health challenge in laboratory diagnosis and is a major consideration for anti-HIV treatment. These viruses share common modes of transmission that is; through blood and body fluids. Further, there is little information on sero-profiles and circulating HBV genotypes in Kenya. This study aimed at determining seroprofiles, genetic diversity and drug resistance of HBV among HIV infected individuals attending comprehensive care clinic of Mama Lucy Kibaki Hospital Nairobi, Kenya. Ethical approval was sought from Kenyatta university ethics review committee and a cross-sectional study was conducted whereby the participants/guardians who gave consent/assent were included into the study. Their demographic data was collected using a questionnaire and 5ml of blood was collected from each participant using systematic sampling technique. The HBV seroprofiles were determined using the HBV-5 panel rapid diagnostic cassette according to the manufacturer’s instructions (Healthaw Medical limited, Hangzhou, China) . Viral DNA was extracted using Qiagen® Miniviral DNA isolation kit and the HBV-pol gene amplified by nested PCR. The amplified products were sequenced using the Big Dye® sequence terminator kit (Applied Biosystem®) on an automated ABI 310 sequencer (Applied Biosystem, Foster City CA). The generated sequences of HBV were analysed for drug resistance and genetic diversity determined using Molecular Evolutionary Genetics Analysis (MEGA5). Four hundred participants were recruited and 293 were females, 107 were males with their age ranging between 4 months and 73 years. Of the 400 sera; (111) 27.8% were HBV immunized, 19 (4.8%) were recovery cases, 12 (3%) had acute disease, 10 (2.5%) were chronic, 9 (2.3%) had occult HBV and 7 (1.8%) asymptomatic. The prevalence of HBV/HIV was found to be 7.25% based on the presence of surface antigen. After the confirmation of HBV DNA by gel electrophoresis, 13 samples were successfully amplified, purified and sequenced. All the 13 sequences were confirmed as HBV genotype A. Nucleotide drug resistance mutations were found in six (6) participants’ samples. These were rtV173L, rtL180M, rtM204V which are major mutations associated with lamivudine, telbivudine and emtricitabine resistance. This study indicates that the utility of HBV seromarkers and infection staging are important in disease diagnosis. The findings confirm that, HBV genotype A remains the most predominant genotype circulating in Nairobi.This study proposes a need for a continuous surveillance of HBV genotype trends and evolution of drug resistance because the current findings have major implications on treatment of HBV in Kenya
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SYNTHESIS AND SPECTROPHOTOMETRIC ACTIVITY OF PHTHALOCYANINE CONJUGATED TO METAL NANOPARTICLES AND EVALUATION OF THEIR ANTIBACTERIAL PROPERTIES
(2021-11) NYAMU N, SAMUEL (MSc. Chemistry)
ABSTRACT {In recent times, microbial pathogens have increasingly shown multi-drug resistance leading to a growing concern. Analysis of 624 isolates from Kenya revealed 88% of isolates tested Were multi-drug resistant. It is estimated that about 4,150,000 deaths will be attributed to antimicrobial resistance (AMR) in Africa by 2050. Therefore, current research is increasingly focusing on antimicrobial photodynamic therapy that utilizes non-toxic photo. sensitizer exhibiting visible light activity towards the generation of free radicals and singlet oxygen which kill pathogens. The photo-sensitizer may be conjugated to visible-light responsive nanoparticles to further increase their photochemical activities, Phthalocyanine (Pc) is one of the promising dyes that have shown notable photochemical stability, a high degree of aromaticity and ease of structural modification resulting in increased activities. Despite these attractive properties, its antibacterial properties remain under researched, therefore, this study aimed to tuning the photodynamic antibacterial activity of Pc by using electron withdrawing and electron donating group, conjugating the obtained compounds to silver nanoparticles (AgNps) and 2ine oxide nanoparticles (Zn0-Nps) and evaluating the activity of the resulting composites against drug resistant strains Escherichia coli, Staphylococeus aureus, Bacillus subtilis and Salmonella typhi. 2,9,1623-tetraciodo. 3.10,17,24-tetra-(3 methoxyprop-I-nyl) Pc (6) and. 2,9,16,23-tetra-iodo-3,10,17.24-tetra cthylsulfonyl Pc (10) were synthesized respectively. The Pc derivatives were synthesized upon exposure to microwave radiation under solvent-free conditions. Both Pc 6 and 10 Were B-form in nature with monoclinic structure confirmed by powder XRD. Pc (6) had two absorption bands between 345-364 nm for B-band and 660-680 nm for Q-band while Pc (10) indicated two major absorption bands between 354-360 nm for B-band and 685,689 nm bands for Q-band of UV-Vis absorption in different solvents, FTIR confirmed the Presence of attached substituent groups to the Pes. Pc 6 and 10 showed singlet oxygen quantum yield (A) values of 0.53 and 0.63 and fluorescence quantum yield (DE) value of 0.14 and 0.13 respectively. The Pc 10 exhibited zone of inhibition >230.12 ug/ml for all the strains, making it more effective as compared to Pc 6. In addition, all strains of tested bacteria were susceptible to Pc 10 at a concentration > 31.25 jig/ml. ‘This implies that Substituting Pc with electron withdrawing allows it to release more singlet oxygen in Presence of light and which results to oxidation of the bacterial wall. AgNp and Zn0-Np were synthesized by microwave assisted extraction, The UV-Vis was used to confirm the formation of nanoparticles and also characterization done using FTIR, TEM and SEM, AgNps were of diameters < 58.5 nm that easily conjugated to Pc while Zn0-Nps were of large grain size > 95, the particles aggregated making it difficult to conjugate with Pes, Conjugation of Pc 10 with AgNp < 10 nm resulted to a more superior antibacterial as compared to unconjugated Pe 10. There was no significant different for zone' of inhibition for Pc 10 conjugated to AgNp when compared to positive control ciprofloxacin at $00 ua/ml for all the strains except for B. subtilis. It had minimum inhibitory concentration (MIC) values of 3.91, 1.96, 1.96 and 15.63 ug/ml, for E. coli, S aureus, B. subtilis and S phi respectively. Both Pc showed no toxicity on Vero cells at concentration of 600 jig/ml In overall, this work reports the successful tuning of the photo-chemical and antibacterial Photodynamic properties of Pc using electron withdrawing and donating substituent, The Pc 10 with electron withdrawing group exhibit superior antibacterial activity which is further enhanced by conjugation with AgNp of < 10 nm.